MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2507 · 46 genes shown · anchor pirG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2507 (family_assigned) — MmpS family transport accessory protein Rv2507 pirG (requalified) — exported repetitive protein pirG Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 ptrp (family_assigned) — hypothetical protein ptrp Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c PPE13 (family_assigned) — PPE family protein PPE13 PPE13 Rv2506 (family_assigned) — TetR/AcrR family transcriptional regulator Rv2506 Rv0497 (family_assigned) — hypothetical protein Rv0497 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE10 (family_assigned) — PPE family protein PPE10 PPE10 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 htpG (requalified) — molecular chaperone HtpG htpG mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 ephC (requalified) — epoxide hydrolase EphC ephC pks13 (requalified) — polyketide synthase Pks13 pks13 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1157c (dark) — hypothetical protein Rv1157c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pimE (requalified) — mannosyltransferase pimE eno (requalified) — phosphopyruvate hydratase eno ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv2082 (dark) — DUF5631 domain-containing protein Rv2082

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.