MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2505c · 46 genes shown · anchor accD1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadD35 (family_assigned) — AMP-binding protein fadD35 rplF (requalified) — 50S ribosomal protein L6 rplF ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 pks15 (requalified) — polyketide synthase pks15 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 pks13 (requalified) — polyketide synthase Pks13 pks13 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB pks1 (requalified) — polyketide synthase pks1 rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB fas (requalified) — fatty acid synthase fas ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 pks17 (requalified) — polyketide synthase pks17 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 fadB (requalified) — fatty oxidation protein FadB fadB Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.