MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2474c · 46 genes shown · anchor gdh · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv2475c (family_assigned) — thioesterase family protein Rv2475c gdh (requalified) — NAD-glutamate dehydrogenase gdh ettA (requalified) — energy-dependent translational throttle protein Et ettA Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0358 (requalified) — peptidase M50 Rv0358 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rplU (requalified) — 50S ribosomal protein L21 rplU rplM (requalified) — 50S ribosomal protein L13 rplM rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsC (requalified) — 30S ribosomal protein S3 rpsC rplD (requalified) — 50S ribosomal protein L4 rplD rplR (requalified) — 50S ribosomal protein L18 rplR Rv3437 (dark) — DUF2510 domain-containing protein Rv3437 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv3212 (family_assigned) — hypothetical protein Rv3212 folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv0359 (family_assigned) — site-2 protease family protein Rv0359 purA (requalified) — adenylosuccinate synthase purA Rv3217c (dark) — hypothetical protein Rv3217c menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c rsdA (requalified) — anti-sigma D factor RsdA rsdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.