MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2466c · 46 genes shown · anchor rpiB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c mshD (requalified) — mycothiol synthase mshD mca (requalified) — mycothiol conjugate amidase Mca mca mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv0360c (family_assigned) — hypothetical protein Rv0360c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC pepN (requalified) — aminopeptidase PepN pepN mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA glbO (requalified) — group 2 truncated hemoglobin GlbO glbO rpe (requalified) — ribulose-phosphate 3-epimerase rpe upp (requalified) — uracil phosphoribosyltransferase upp tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rbsK (requalified) — ribokinase RbsK rbsK gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC trxB1 (requalified) — thioredoxin trxB1 infA (requalified) — translation initiation factor IF-1 infA nei (requalified) — endonuclease VIII Nei2 nei polA (requalified) — DNA polymerase I polA coaE (requalified) — dephospho-CoA kinase coaE Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1083 (dark) — hypothetical protein Rv1083 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 dinP (requalified) — DNA polymerase IV dinP Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI Rv0361 (family_assigned) — hypothetical protein Rv0361 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysE (requalified) — serine O-acetyltransferase cysE Rv2134c (dark) — hypothetical protein Rv2134c Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c pepB (requalified) — leucyl aminopeptidase pepB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.