MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2464c · 46 genes shown · anchor rpiB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c nei (requalified) — endonuclease VIII Nei2 nei rpiB (requalified) — ribose-5-phosphate isomerase B rpiB polA (requalified) — DNA polymerase I polA Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c pepN (requalified) — aminopeptidase PepN pepN coaE (requalified) — dephospho-CoA kinase coaE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 nth (requalified) — endonuclease III nth Rv1870c (family_assigned) — hypothetical protein Rv1870c fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 lhr (requalified) — ATP-dependent helicase lhr Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 Rv2191 (family_assigned) — hypothetical protein Rv2191 rpe (requalified) — ribulose-phosphate 3-epimerase rpe upp (requalified) — uracil phosphoribosyltransferase upp tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rbsK (requalified) — ribokinase RbsK rbsK gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 mshD (requalified) — mycothiol synthase mshD mca (requalified) — mycothiol conjugate amidase Mca mca mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB pepB (requalified) — leucyl aminopeptidase pepB ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA glyA1 (requalified) — serine hydroxymethyltransferase glyA1 kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA rnhB (requalified) — ribonuclease HII rnhB ligC (requalified) — ATP-dependent DNA ligase ligC xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2828A (dark) — hypothetical protein Rv2828A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.