MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2460c · 46 genes shown · anchor clpP1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 tig (requalified) — trigger factor tig clpB (requalified) — chaperone protein ClpB clpB Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 groES (requalified) — chaperonin GroES groES def (requalified) — peptide deformylase def clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA groEL2 (requalified) — chaperonin GroEL groEL2 Rv2456c (requalified) — MFS transporter Rv2456c mobA (requalified) — molybdenum cofactor guanylyltransferase mobA mmuM (requalified) — homocysteine S-methyltransferase mmuM ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS dnaK (requalified) — molecular chaperone DnaK dnaK Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rplC (requalified) — 50S ribosomal protein L3 rplC rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB grpE (requalified) — nucleotide exchange factor GrpE grpE Rv2264c (family_assigned) — Hsp70 family protein Rv2264c recR (requalified) — recombination mediator RecR recR Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3714c (family_assigned) — hypothetical protein Rv3714c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX rimP (requalified) — ribosome maturation factor RimP rimP Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c groEL1 (requalified) — chaperonin GroEL groEL1 htpG (requalified) — molecular chaperone HtpG htpG rplU (requalified) — 50S ribosomal protein L21 rplU rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.