MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2456c · 46 genes shown · anchor clpX · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2456c (requalified) — MFS transporter Rv2456c clpX (family_assigned) — ATP-dependent Clp protease ATP-binding subunit Clp clpX Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mobA (requalified) — molybdenum cofactor guanylyltransferase mobA cdh (requalified) — CDP-diacylglycerol diphosphatase cdh Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mmuM (requalified) — homocysteine S-methyltransferase mmuM Rv3190c (dark) — hypothetical protein Rv3190c Rv2452c (dark) — hypothetical protein Rv2452c Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c Rv2425c (family_assigned) — VWA domain-containing protein Rv2425c Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 pta (requalified) — phosphate acetyltransferase pta pykA (requalified) — pyruvate kinase pykA sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c Rv0345 (family_assigned) — hypothetical protein Rv0345 Rv2288 (dark) — hypothetical protein Rv2288 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 aroF (requalified) — chorismate synthase aroF sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB metH (requalified) — methionine synthase metH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC metK (requalified) — S-adenosylmethionine synthetase metK PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv2209 (requalified) — MFS transporter Rv2209 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 mbtI (requalified) — salicylate synthase mbtI mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtK (requalified) — lysine N-acyltransferase MbtK mbtK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.