MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2428 · 45 genes shown · anchor ahpD · open gene page → · ← back to 1 hop

Evidence: Min score 0
ahpC (requalified) — peroxiredoxin AhpC ahpC ahpD (requalified) — alkyl hydroperoxide reductase ahpD trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c mpt53 (requalified) — protein disulfide oxidoreductase mpt53 Rv0526 (requalified) — thioredoxin Rv0526 zur (requalified) — zinc uptake transcriptional repressor Zur zur furA (family_assigned) — Fur family transcriptional regulator furA bfrB (requalified) — ferritin BfrB bfrB Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 cysC (requalified) — adenylyl-sulfate kinase cysC Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT trxC (requalified) — thioredoxin trxC trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxA (family_assigned) — thioredoxin family protein trxA mpt70 (family_assigned) — fasciclin domain-containing protein mpt70 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA Rv0794c (requalified) — oxidoreductase Rv0794c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv1676 (family_assigned) — peroxiredoxin-like family protein Rv1676 Rv2877c (family_assigned) — integral membrane protein Rv2877c lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA lmeA (requalified) — mannan chain length control protein LmeA lmeA cysA2 (requalified) — sulfurtransferase cysA2 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c nth (requalified) — endonuclease III nth Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.