MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2407 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2407 (family_assigned) — Rv2407 family type 3 sulfatase Rv2407 Rv2406c (family_assigned) — CBS domain-containing protein Rv2406c Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 Rv3762c (requalified) — alkyl/aryl-sulfatase Rv3762c Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv0484c (family_assigned) — SDR family oxidoreductase Rv0484c orn (requalified) — oligoribonuclease orn hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3828c (requalified) — resolvase Rv3828c Rv3827c (requalified) — transposase Rv3827c phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 sigA (requalified) — RNA polymerase sigma factor sigA sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv0047c (family_assigned) — PadR family transcriptional regulator Rv0047c Rv0042c (family_assigned) — transcriptional regulator Rv0042c Rv3077 (requalified) — hydrolase Rv3077 atsA (requalified) — arylsulfatase AtsA atsA atsB (requalified) — arylsulfatase AtsB atsB Rv0296c (requalified) — sulfatase Rv0296c atsD (requalified) — arylsulfatase AtsD atsD Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 fadE36 (family_assigned) — phosphotransferase family protein fadE36 lpqH (requalified) — lipoprotein LpqH lpqH Rv1728c (requalified) — glycoside hydrolase Rv1728c Rv1729c (requalified) — class I SAM-dependent methyltransferase Rv1729c lipD (requalified) — lipase LipD lipD Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 Rv1723 (requalified) — serine hydrolase Rv1723 Rv1367c (family_assigned) — hypothetical protein Rv1367c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.