MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2403c · 45 genes shown · anchor lepA · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppR (family_assigned) — sensor domain-containing protein lppR lepA (requalified) — translation elongation factor 4 lepA Rv2405 (family_assigned) — hypothetical protein Rv2405 lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA lpqI (requalified) — lipoprotein LpqI lpqI lpqT (requalified) — lipoprotein LpqT lpqT lpqL (family_assigned) — M28 family metallopeptidase lpqL fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB lpqX (dark) — hypothetical protein lpqX lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB lpqM (requalified) — neutral zinc metallopeptidase lpqM lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW rplS (requalified) — 50S ribosomal protein L19 rplS rplM (requalified) — 50S ribosomal protein L13 rplM rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsP (requalified) — 30S ribosomal protein S16 rpsP rplQ (requalified) — 50S ribosomal protein L17 rplQ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY mazE6 (requalified) — antitoxin MazE6 mazE6 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1204c (family_assigned) — hypothetical protein Rv1204c fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2305 (family_assigned) — hypothetical protein Rv2305 modB (family_assigned) — ABC transporter permease modB modC (family_assigned) — sulfate/molybdate ABC transporter ATP-binding prot modC cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT apa (family_assigned) — hypothetical protein apa cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c Rv0236A (dark) — hypothetical protein Rv0236A Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 aftD (family_assigned) — DUF3367 domain-containing protein aftD lpqR (family_assigned) — M15 family metallopeptidase lpqR vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 prsA (requalified) — ribose-phosphate diphosphokinase prsA glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU pth (requalified) — aminoacyl-tRNA hydrolase pth Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.