MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2396 · 46 genes shown · anchor aprB · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS41 (requalified) — acid and phagosome regulated protein AprC PE_PGRS41 aprB (requalified) — acid and phagosome regulated protein AprB aprB zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 aprA (requalified) — acid and phagosome regulated protein AprA aprA Rv2395 (family_assigned) — oligopeptide transporter%2C OPT family Rv2395 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c tatC (family_assigned) — twin-arginine translocase subunit TatC tatC Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE11 (family_assigned) — PPE family protein PPE11 PPE11 Rv3289c (dark) — hypothetical protein Rv3289c phoP (requalified) — two-component system response regulator PhoP phoP Rv0047c (family_assigned) — PadR family transcriptional regulator Rv0047c PE34 (family_assigned) — PE family protein PE34 PE34 gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT lppL (family_assigned) — hypothetical protein lppL frr (requalified) — ribosome recycling factor frr omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 upp (requalified) — uracil phosphoribosyltransferase upp Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB che1 (requalified) — ferrochelatase che1 cysH (requalified) — phosphoadenylyl-sulfate reductase cysH sirA (requalified) — sulfite reductase sirA atpB (family_assigned) — F0F1 ATP synthase subunit A atpB Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv3896c (requalified) — transglycosylase Rv3896c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA tatB (requalified) — Sec-independent protein translocase protein TatB tatB helY (requalified) — RNA helicase helY pafA (requalified) — Pup--protein ligase pafA Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c pafB (family_assigned) — YafY family protein pafB rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.