MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2362c · 46 genes shown · anchor uppS · open gene page → · ← back to 1 hop

Evidence: Min score 0
recO (requalified) — DNA repair protein RecO recO recR (requalified) — recombination mediator RecR recR Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c Rv2360c (family_assigned) — hypothetical protein Rv2360c amiA2 (requalified) — amidase amiA2 phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c gltB (family_assigned) — glutamate synthase large subunit gltB era (requalified) — GTPase Era era rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2478c (family_assigned) — hypothetical protein Rv2478c lepB (requalified) — signal peptidase I lepB iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c Rv3717 (family_assigned) — hypothetical protein Rv3717 espL (requalified) — type VII secretion system ESX-1 associated protein espL uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3714c (family_assigned) — hypothetical protein Rv3714c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr cdsA (requalified) — phosphatidate cytidylyltransferase cdsA Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0497 (family_assigned) — hypothetical protein Rv0497 gatB (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatB acyP (requalified) — acylphosphatase acyP Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 gatC (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatC Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2369c (dark) — hypothetical protein Rv2369c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.