MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2313c · 46 genes shown · anchor uspB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2313c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2313c Rv2315c (family_assigned) — TldD/PmbA family protein Rv2315c Rv2314c (family_assigned) — TldD/PmbA family protein Rv2314c uspB (family_assigned) — sugar ABC transporter permease UspB uspB uspA (family_assigned) — sugar ABC transporter permease uspA uspC (family_assigned) — sugar ABC transporter substrate-binding protein uspC cysC (requalified) — adenylyl-sulfate kinase cysC Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 modC (family_assigned) — sulfate/molybdate ABC transporter ATP-binding prot modC cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv1519 (family_assigned) — hypothetical protein Rv1519 Rv3651 (family_assigned) — DUF5628 domain-containing protein Rv3651 Rv1473A (family_assigned) — transcriptional regulator Rv1473A ugpA (family_assigned) — sugar ABC transporter permease ugpA Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC ugpE (family_assigned) — carbohydrate ABC transporter permease ugpE Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysH (requalified) — phosphoadenylyl-sulfate reductase cysH cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA sodC (family_assigned) — superoxide dismutase family protein sodC ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA pepN (requalified) — aminopeptidase PepN pepN pepB (requalified) — leucyl aminopeptidase pepB modB (family_assigned) — ABC transporter permease modB modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA apa (family_assigned) — hypothetical protein apa Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1520 (requalified) — glycosyltransferase Rv1520 Rv1518 (requalified) — glycosyltransferase Rv1518 Rv1752 (family_assigned) — hypothetical protein Rv1752 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.