MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2298 · 46 genes shown · anchor xylB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2298 (requalified) — aldo/keto reductase Rv2298 eno (requalified) — phosphopyruvate hydratase eno Rv2971 (requalified) — aldo/keto reductase Rv2971 rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB tsnR (requalified) — RNA methyltransferase tsnR Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0380c (requalified) — RNA methyltransferase Rv0380c xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv2970A (family_assigned) — hypothetical protein Rv2970A glpK (requalified) — glycerol kinase GlpK glpK Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 Rv2297 (dark) — hypothetical protein Rv2297 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 lipN (requalified) — lipase/esterase LipN lipN metH (requalified) — methionine synthase metH Rv2969c (requalified) — mycothiol-dependent reductase Rv2969c cysS1 (requalified) — cysteine--tRNA ligase cysS1 rplK (requalified) — 50S ribosomal protein L11 rplK ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT carD (requalified) — RNA polymerase-binding transcription factor CarD carD rplT (requalified) — 50S ribosomal protein L20 rplT rsfS (requalified) — ribosome silencing factor rsfS infC (requalified) — translation initiation factor IF-3 infC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c rplU (requalified) — 50S ribosomal protein L21 rplU Rv0381c (dark) — hypothetical protein Rv0381c pyrE (requalified) — orotate phosphoribosyltransferase pyrE rpe (requalified) — ribulose-phosphate 3-epimerase rpe fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.