MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2292c · 46 genes shown · anchor gltB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2292c (family_assigned) — hypothetical protein Rv2292c Rv2293c (family_assigned) — hypothetical protein Rv2293c gltB (family_assigned) — glutamate synthase large subunit gltB fas (requalified) — fatty acid synthase fas pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP Rv2294 (family_assigned) — MalY/PatB family protein Rv2294 nadE (requalified) — NAD(+) synthase nadE Rv0325 (family_assigned) — hypothetical protein Rv0325 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE24 (family_assigned) — PPE family protein PPE24 PPE24 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC cbs (requalified) — cystathionine beta-synthase cbs metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD cobB (requalified) — NAD-dependent protein deacylase cobB ppnK (requalified) — NAD kinase ppnK sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA nudC (requalified) — NAD(+) diphosphatase nudC Rv0326 (family_assigned) — hypothetical protein Rv0326 Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.