MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2290 · 44 genes shown · anchor sseB · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppO (requalified) — lipoprotein LpqH lppO sseB (requalified) — sulfurtransferase sseB Rv2288 (dark) — hypothetical protein Rv2288 cdh (requalified) — CDP-diacylglycerol diphosphatase cdh yjcE (requalified) — Na(+)/H(+) transporter yjcE Rv3669 (family_assigned) — phage holin family protein Rv3669 Rv1352 (family_assigned) — hypothetical protein Rv1352 lpqL (family_assigned) — M28 family metallopeptidase lpqL mmpL9 (requalified) — RND transporter MmpL9 mmpL9 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE Rv1810 (family_assigned) — hypothetical protein Rv1810 Rv1573 (dark) — hypothetical protein Rv1573 galE1 (requalified) — UDP-glucose 4-epimerase galE1 sseA (requalified) — sulfurtransferase sseA cysA2 (requalified) — sulfurtransferase cysA2 iscS (family_assigned) — cysteine desulfurase family protein iscS sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 Rv2286c (family_assigned) — DsbA family protein Rv2286c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 glpK (requalified) — glycerol kinase GlpK glpK omamB (requalified) — hypothetical protein omamB ephE (family_assigned) — alpha/beta hydrolase ephE Rv3668c (requalified) — protease Rv3668c Rv3207c (family_assigned) — hypothetical protein Rv3207c Rv1417 (family_assigned) — PH domain-containing protein Rv1417 Rv0862c (family_assigned) — helicase-associated domain-containing protein Rv0862c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv1351 (dark) — hypothetical protein Rv1351 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 PPE26 (family_assigned) — PPE family protein PPE26 PPE26 Rv0431 (requalified) — tuberculin-like peptide Rv0431 lpqM (requalified) — neutral zinc metallopeptidase lpqM lipT (requalified) — carboxylesterase LipT lipT thiS (requalified) — sulfur carrier protein ThiS thiS otsB2 (requalified) — trehalose-phosphatase otsB2 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.