MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2287 · 46 genes shown · anchor cdh · open gene page → · ← back to 1 hop

Evidence: Min score 0
yjcE (requalified) — Na(+)/H(+) transporter yjcE Rv2288 (dark) — hypothetical protein Rv2288 cdh (requalified) — CDP-diacylglycerol diphosphatase cdh glpK (requalified) — glycerol kinase GlpK glpK Rv2286c (family_assigned) — DsbA family protein Rv2286c omamB (requalified) — hypothetical protein omamB lppO (requalified) — lipoprotein LpqH lppO Rv1973 (family_assigned) — hypothetical protein Rv1973 Rv1363c (dark) — hypothetical protein Rv1363c Rv2390c (family_assigned) — hypothetical protein Rv2390c omamA (requalified) — hypothetical protein omamA Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1972 (requalified) — Mce associated membrane protein Rv1972 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA mca (requalified) — mycothiol conjugate amidase Mca mca mshD (requalified) — mycothiol synthase mshD Rv3075c (requalified) — CoA ester lyase Rv3075c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 sseB (requalified) — sulfurtransferase sseB Rv3669 (family_assigned) — phage holin family protein Rv3669 Rv1352 (family_assigned) — hypothetical protein Rv1352 mce3A (family_assigned) — Mce family protein Mce3A mce3A lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3F (family_assigned) — MlaD family protein mce3F mce3C (family_assigned) — virulence factor Mce family protein mce3C Rv1975 (family_assigned) — CAP domain-containing protein Rv1975 Rv3492c (requalified) — Mce associated protein Rv3492c mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A mce2F (family_assigned) — MlaD family protein mce2F rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.