MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2286c · 46 genes shown · anchor mca · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2286c (family_assigned) — DsbA family protein Rv2286c mca (requalified) — mycothiol conjugate amidase Mca mca mshD (requalified) — mycothiol synthase mshD yjcE (requalified) — Na(+)/H(+) transporter yjcE Rv3075c (requalified) — CoA ester lyase Rv3075c cdh (requalified) — CDP-diacylglycerol diphosphatase cdh Rv2288 (dark) — hypothetical protein Rv2288 Rv0360c (family_assigned) — hypothetical protein Rv0360c mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfE (requalified) — resuscitation-promoting factor protein RpfE rpfE pup (family_assigned) — ubiquitin-like protein Pup pup Rv1083 (dark) — hypothetical protein Rv1083 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c glpK (requalified) — glycerol kinase GlpK glpK omamB (requalified) — hypothetical protein omamB lppO (requalified) — lipoprotein LpqH lppO citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE fucA (requalified) — L-fuculose-phosphate aldolase fucA Rv3076 (family_assigned) — SRPBCC family protein Rv3076 hab (requalified) — hydrogenase hab Rv3073c (dark) — DUF488 domain-containing protein Rv3073c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv0361 (family_assigned) — hypothetical protein Rv0361 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1333 (family_assigned) — P1 family peptidase Rv1333 mec (requalified) — CysO-cysteine peptidase mec clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.