MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2256c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2256c (dark) — hypothetical protein Rv2256c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv3258c (dark) — hypothetical protein Rv3258c Rv0004 (requalified) — DNA replication protein DciA Rv0004 whiA (family_assigned) — DNA-binding protein WhiA whiA Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A Rv2147c (requalified) — cell division protein SepF Rv2147c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2258c (requalified) — class I SAM-dependent methyltransferase Rv2258c lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt mscR (requalified) — S-(hydroxymethyl)mycothiol dehydrogenase mscR Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv2239c (family_assigned) — hypothetical protein Rv2239c cei (requalified) — envelope integrity protein Cei cei Rv2681 (requalified) — ribonuclease D Rv2681 hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv2917 (family_assigned) — hypothetical protein Rv2917 Rv2035 (family_assigned) — SRPBCC family protein Rv2035 Rv2036 (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv2036 Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.