MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2238c · 46 genes shown · anchor aceE · open gene page → · ← back to 1 hop

Evidence: Min score 0
ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv2240c (family_assigned) — hypothetical protein Rv2240c trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC aceE (requalified) — pyruvate dehydrogenase E1 component aceE rpsA (requalified) — 30S ribosomal protein S1 rpsA lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt Rv2237A (dark) — hypothetical protein Rv2237A Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv2242 (family_assigned) — PucR family transcriptional regulator Rv2242 ahpC (requalified) — peroxiredoxin AhpC ahpC bcpB (requalified) — peroxiredoxin BcpB bcpB Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c frr (requalified) — ribosome recycling factor frr Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 Rv0497 (family_assigned) — hypothetical protein Rv0497 trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpE (requalified) — anthranilate synthase component I trpE trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD mbtI (requalified) — salicylate synthase mbtI dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC pykA (requalified) — pyruvate kinase pykA mez (requalified) — NAD-dependent malic enzyme mez rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsD (requalified) — 30S ribosomal protein S4 rpsD ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA yidC (requalified) — membrane protein insertase YidC yidC Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 mce1B (family_assigned) — virulence factor Mce family protein mce1B fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.