MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2235 · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2235 (family_assigned) — SURF1 family protein Rv2235 Rv1456c (requalified) — heme A synthase Rv1456c ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrA (requalified) — hypothetical protein qcrA ctaB (requalified) — heme o synthase ctaB ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT ssb (family_assigned) — single-stranded DNA-binding protein ssb hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 qcrC (requalified) — cytochrome c qcrC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaE (family_assigned) — heme-copper oxidase subunit III ctaE hemZ (requalified) — ferrochelatase hemZ menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.