MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2234 · 38 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv2235 (family_assigned) — SURF1 family protein Rv2235 ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c cobC (requalified) — aminotransferase cobC vapC16 (requalified) — ribonuclease VapC16 vapC16 mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA Rv1456c (requalified) — heme A synthase Rv1456c cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT ssb (family_assigned) — single-stranded DNA-binding protein ssb hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC papA1 (requalified) — acyltransferase PapA1 papA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.