MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2228c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2478c (family_assigned) — hypothetical protein Rv2478c rnhB (requalified) — ribonuclease HII rnhB ptpA (requalified) — protein-tyrosine-phosphatase ptpA Rv2235 (family_assigned) — SURF1 family protein Rv2235 ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA vapC16 (requalified) — ribonuclease VapC16 vapC16 cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 rplI (requalified) — 50S ribosomal protein L9 rplI rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 dnaB (requalified) — replicative DNA helicase dnaB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 ettA (requalified) — energy-dependent translational throttle protein Et ettA priA (family_assigned) — primosomal protein N' priA lepB (requalified) — signal peptidase I lepB rplS (requalified) — 50S ribosomal protein L19 rplS dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c coaE (requalified) — dephospho-CoA kinase coaE ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv1456c (requalified) — heme A synthase Rv1456c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.