MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2219A · 46 genes shown · anchor glnA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2219A (family_assigned) — membrane protein Rv2219A glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 qcrC (requalified) — cytochrome c qcrC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c Rv2242 (family_assigned) — PucR family transcriptional regulator Rv2242 Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 Rv0504c (family_assigned) — MaoC family dehydratase N-terminal domain-containi Rv0504c Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv2146c (family_assigned) — YggT family protein Rv2146c hadA (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadA hadA Rv1342c (family_assigned) — hypothetical protein Rv1342c gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA ctaE (family_assigned) — heme-copper oxidase subunit III ctaE Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2256c (dark) — hypothetical protein Rv2256c fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD aceE (requalified) — pyruvate dehydrogenase E1 component aceE kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526 Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hadB (family_assigned) — (3R)-hydroxyacyl-ACP dehydratase subunit HadB hadB cmaA2 (requalified) — cyclopropane mycolic acid synthase CmaA2 cmaA2 serB1 (requalified) — phosphoserine phosphatase SerB serB1 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 pepA (family_assigned) — S1C family serine protease pepA Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c Rv1456c (requalified) — heme A synthase Rv1456c mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.