MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2206 · 46 genes shown · anchor cobT · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv2205c (requalified) — glycerate kinase Rv2205c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c Rv0807 (family_assigned) — sterol carrier family protein Rv0807 Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2708c (family_assigned) — hypothetical protein Rv2708c cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobQ1 (requalified) — cobyric acid synthase cobQ1 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS nrdH (requalified) — redoxin NrdH nrdH Rv2698 (dark) — DUF3093 domain-containing protein Rv2698 dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c purF (requalified) — amidophosphoribosyltransferase purF lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.