MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2198c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpS3 (family_assigned) — MmpS family transport accessory protein mmpS3 Rv2197c (requalified) — transmembrane protein Rv2197c Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC wag31 (requalified) — cell wall synthesis protein Wag31 wag31 fhaA (requalified) — cell division-associated protein FhaA fhaA ftsQ (requalified) — cell division protein FtsQ ftsQ pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB ppa (requalified) — inorganic diphosphatase ppa Rv3360 (family_assigned) — FHA domain-containing protein Rv3360 asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB Rv0175 (family_assigned) — hypothetical protein Rv0175 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2144c (dark) — hypothetical protein Rv2144c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c fhaB (family_assigned) — FHA domain-containing protein fhaB pknA (requalified) — serine/threonine protein kinase PknA pknA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 garA (requalified) — glycogen accumulation regulator GarA garA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 cut3 (family_assigned) — cutinase family protein cut3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.