MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2190c · 46 genes shown · anchor pimB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ripC (requalified) — peptidoglycan hydrolase RipC ripC Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv2189c (dark) — hypothetical protein Rv2189c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv0175 (family_assigned) — hypothetical protein Rv0175 pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 rpfB (requalified) — resuscitation-promoting factor RpfB rpfB Rv1885c (requalified) — chorismate mutase Rv1885c sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rip (requalified) — zinc metalloprotease Rip rip Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv1362c (family_assigned) — hypothetical protein Rv1362c rplJ (requalified) — 50S ribosomal protein L10 rplJ Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C mce1B (family_assigned) — virulence factor Mce family protein mce1B Rv2611c (requalified) — phosphatidylinositol mannoside acyltransferase Rv2611c pimA (requalified) — phosphatidyl-myo-inositol alpha-mannosyltransferas pimA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.