MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2189c · 46 genes shown · anchor ripC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2189c (dark) — hypothetical protein Rv2189c ripC (requalified) — peptidoglycan hydrolase RipC ripC pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv1362c (family_assigned) — hypothetical protein Rv1362c rplJ (requalified) — 50S ribosomal protein L10 rplJ Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv1363c (dark) — hypothetical protein Rv1363c Rv0250c (family_assigned) — hypothetical protein Rv0250c rplW (requalified) — 50S ribosomal protein L23 rplW rplX (requalified) — 50S ribosomal protein L24 rplX icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv2611c (requalified) — phosphatidylinositol mannoside acyltransferase Rv2611c pimA (requalified) — phosphatidyl-myo-inositol alpha-mannosyltransferas pimA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv2529 (family_assigned) — hypothetical protein Rv2529 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 htpG (requalified) — molecular chaperone HtpG htpG mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 mce2F (family_assigned) — MlaD family protein mce2F mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A mce1F (family_assigned) — MCE family protein mce1F mce4A (family_assigned) — Mce family protein Mce4A mce4A rplL (requalified) — 50S ribosomal protein L7/L12 rplL rplK (requalified) — 50S ribosomal protein L11 rplK rpsF (requalified) — 30S ribosomal protein S6 rpsF rplR (requalified) — 50S ribosomal protein L18 rplR rplM (requalified) — 50S ribosomal protein L13 rplM Rv0514 (dark) — hypothetical protein Rv0514 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv3492c (requalified) — Mce associated protein Rv3492c Rv1973 (family_assigned) — hypothetical protein Rv1973

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.