MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2173 · 32 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 mptA (requalified) — alpha-(1->6)-mannopyranosyltransferase A mptA Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c menJ (requalified) — menaquinone reductase menJ mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 metH (requalified) — methionine synthase metH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE Rv3015c (requalified) — methionine synthase Rv3015c metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv2360c (family_assigned) — hypothetical protein Rv2360c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr cdsA (requalified) — phosphatidate cytidylyltransferase cdsA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.