MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2154c · 35 genes shown · anchor murG · open gene page → · ← back to 1 hop

Evidence: Min score 0
ftsW (family_assigned) — putative lipid II flippase FtsW ftsW murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA ftsZ (requalified) — cell division protein FtsZ ftsZ Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA Rv2147c (requalified) — cell division protein SepF Rv2147c Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c yfiH (family_assigned) — laccase domain-containing protein yfiH Rv2146c (family_assigned) — YggT family protein Rv2146c Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 xerC (requalified) — tyrosine recombinase XerC xerC Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 TB9.4 (family_assigned) — hypothetical protein TB9.4 ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB pirG (requalified) — exported repetitive protein pirG ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.