MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2145c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv2144c (dark) — hypothetical protein Rv2144c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c sepIVA (requalified) — cell division protein SepIVA sepIVA Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2256c (dark) — hypothetical protein Rv2256c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c yfiH (family_assigned) — laccase domain-containing protein yfiH murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF pirG (requalified) — exported repetitive protein pirG Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0181c (family_assigned) — pirin family protein Rv0181c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv0312 (family_assigned) — Hsp70 family protein Rv0312 mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0052 (family_assigned) — hypothetical protein Rv0052 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv3717 (family_assigned) — hypothetical protein Rv3717 ppk2 (requalified) — polyphosphate kinase ppk2 Rv3230c (requalified) — NADPH oxidoreductase Rv3230c Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv0948c (requalified) — chorismate mutase Rv0948c Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c lppM (requalified) — lipoprotein LppM lppM Rv3311 (family_assigned) — primosomal protein Rv3311

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.