MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2139 · 30 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD pyrC (requalified) — dihydroorotase pyrC pyrE (requalified) — orotate phosphoribosyltransferase pyrE Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1382 (requalified) — transporter Rv1382 pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR Rv0381c (dark) — hypothetical protein Rv0381c prsA (requalified) — ribose-phosphate diphosphokinase prsA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 argG (requalified) — argininosuccinate synthase argG Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.