MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2133c · 38 genes shown · anchor uppP · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c helZ (requalified) — DEAD/DEAH box helicase helZ TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 PE_PGRS12 (family_assigned) — PE-PGRS family protein PE_PGRS12 PE_PGRS12 Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c serS (requalified) — serine--tRNA ligase serS Rv2137c (dark) — hypothetical protein Rv2137c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC alaS (requalified) — alanine--tRNA ligase alaS Rv3529c (requalified) — TLR2-mediated response inhibitor Rv3529c Rv2267c (requalified) — sulfotransferase Rv2267c Rv1691 (family_assigned) — hypothetical protein Rv1691 PE_PGRS13 (family_assigned) — PE-PGRS family protein PE_PGRS13 PE_PGRS13 murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 valS (requalified) — valine--tRNA ligase valS yidD (requalified) — membrane protein insertion efficiency factor YidD yidD lppL (family_assigned) — hypothetical protein lppL cysE (requalified) — serine O-acetyltransferase cysE mshD (requalified) — mycothiol synthase mshD Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.