MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2130c · 46 genes shown · anchor cysQ · open gene page → · ← back to 1 hop

Evidence: Min score 0
mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysE (requalified) — serine O-acetyltransferase cysE mshD (requalified) — mycothiol synthase mshD Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv1976c (family_assigned) — NYN domain-containing protein Rv1976c thrS (requalified) — threonine--tRNA ligase thrS Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c alaS (requalified) — alanine--tRNA ligase alaS cysC (requalified) — adenylyl-sulfate kinase cysC cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysH (requalified) — phosphoadenylyl-sulfate reductase cysH nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 cbs (requalified) — cystathionine beta-synthase cbs sdaA (requalified) — L-serine ammonia-lyase sdaA cysS1 (requalified) — cysteine--tRNA ligase cysS1 serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c mca (requalified) — mycothiol conjugate amidase Mca mca helZ (requalified) — DEAD/DEAH box helicase helZ TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c Rv2137c (dark) — hypothetical protein Rv2137c Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c tpx (requalified) — thiol peroxidase tpx Rv2132 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv2132 mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv1171 (family_assigned) — hypothetical protein Rv1171 rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB Rv0881 (requalified) — RNA methyltransferase Rv0881 tsnR (requalified) — RNA methyltransferase tsnR Rv0380c (requalified) — RNA methyltransferase Rv0380c infB (requalified) — translation initiation factor IF-2 infB rplO (requalified) — 50S ribosomal protein L15 rplO rpsO (requalified) — 30S ribosomal protein S15 rpsO Rv2613c (requalified) — ATP adenylyltransferase Rv2613c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.