MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2117 · 29 genes shown · anchor lppK · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2117 (family_assigned) — DUF503 domain-containing protein Rv2117 lppK (family_assigned) — hypothetical protein lppK mpa (requalified) — proteasome ATPase mpa rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA infB (requalified) — translation initiation factor IF-2 infB Rv2840c (family_assigned) — hypothetical protein Rv2840c polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA helZ (requalified) — DEAD/DEAH box helicase helZ ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mec (requalified) — CysO-cysteine peptidase mec glpK (requalified) — glycerol kinase GlpK glpK bpa (requalified) — proteasome activator protein Bpa bpa nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA dinF (family_assigned) — MATE family efflux transporter dinF truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsB (requalified) — 30S ribosomal protein S2 rpsB rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsE (requalified) — 30S ribosomal protein S5 rpsE nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.