MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2111c · 46 genes shown · anchor prcB · open gene page → · ← back to 1 hop

Evidence: Min score 0
pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA mpa (requalified) — proteasome ATPase mpa dop (requalified) — pup deamidase/depupylase dop pafA (requalified) — Pup--protein ligase pafA bpa (requalified) — proteasome activator protein Bpa bpa Rv1457c (family_assigned) — ABC transporter permease Rv1457c mshD (requalified) — mycothiol synthase mshD Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mca (requalified) — mycothiol conjugate amidase Mca mca Rv2286c (family_assigned) — DsbA family protein Rv2286c clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS mec (requalified) — CysO-cysteine peptidase mec glpK (requalified) — glycerol kinase GlpK glpK pafB (family_assigned) — YafY family protein pafB pafC (family_assigned) — YafY family protein pafC rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbD (family_assigned) — ABC transporter permease rfbD Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c Rv1456c (requalified) — heme A synthase Rv1456c mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR csd (requalified) — cysteine desulfurase csd Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv1083 (dark) — hypothetical protein Rv1083 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0360c (family_assigned) — hypothetical protein Rv0360c yjcE (requalified) — Na(+)/H(+) transporter yjcE Rv3075c (requalified) — CoA ester lyase Rv3075c cdh (requalified) — CDP-diacylglycerol diphosphatase cdh Rv2288 (dark) — hypothetical protein Rv2288 Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1333 (family_assigned) — P1 family peptidase Rv1333 clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpB (requalified) — chaperone protein ClpB clpB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.