MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2110c · 46 genes shown · anchor prcA · open gene page → · ← back to 1 hop

Evidence: Min score 0
prcB (family_assigned) — proteasome subunit beta prcB prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup mpa (requalified) — proteasome ATPase mpa bpa (requalified) — proteasome activator protein Bpa bpa dop (requalified) — pup deamidase/depupylase dop mec (requalified) — CysO-cysteine peptidase mec glpK (requalified) — glycerol kinase GlpK glpK pafA (requalified) — Pup--protein ligase pafA Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 rfbD (family_assigned) — ABC transporter permease rfbD cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsS (requalified) — 30S ribosomal protein S19 rpsS glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 pafB (family_assigned) — YafY family protein pafB pafC (family_assigned) — YafY family protein pafC pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA psd (requalified) — phosphatidylserine decarboxylase psd moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA espH (requalified) — type VII secretion system ESX-1 associated protein espH espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espF (requalified) — type VII secretion system ESX-1 associated protein espF eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PE5 (family_assigned) — PE family protein PE5 PE5 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.