MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2085 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2085 (family_assigned) — hypothetical protein Rv2085 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2087 (family_assigned) — Conserved hypothetical protein Rv2087 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2084 (dark) — hypothetical protein Rv2084 Rv2083 (dark) — hypothetical protein Rv2083 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 Rv3899c (family_assigned) — hypothetical protein Rv3899c PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv3349c (requalified) — transposase Rv3349c Rv1749c (family_assigned) — DUF6790 family protein Rv1749c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv1733c (family_assigned) — hypothetical protein Rv1733c pknJ (requalified) — serine/threonine protein kinase PknJ pknJ Rv2305 (family_assigned) — hypothetical protein Rv2305 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2081c (dark) — hypothetical protein Rv2081c pykA (requalified) — pyruvate kinase pykA fadD28 (requalified) — fatty-acid--AMP ligase FAAL28/FadD28 fadD28 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 lppX (requalified) — LppX_LprAFG lipoprotein lppX PPE34 (family_assigned) — PPE family protein PPE34 PPE34 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2209 (requalified) — MFS transporter Rv2209 iniB (requalified) — isoniazid-induced protein IniB iniB PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c hsr1 (requalified) — hypothetical protein hsr1 Rv2311 (family_assigned) — hypothetical protein Rv2311 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.