MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2082 · 37 genes shown · anchor PE_PGRS16 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 Rv2085 (family_assigned) — hypothetical protein Rv2085 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv2087 (family_assigned) — Conserved hypothetical protein Rv2087 Rv3349c (requalified) — transposase Rv3349c PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv3899c (family_assigned) — hypothetical protein Rv3899c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 pykA (requalified) — pyruvate kinase pykA Rv2081c (dark) — hypothetical protein Rv2081c Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A iniB (requalified) — isoniazid-induced protein IniB iniB Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE12 (family_assigned) — PPE family protein PPE12 PPE12 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv2209 (requalified) — MFS transporter Rv2209

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.