MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2079 · 46 genes shown · anchor lppJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2078 (family_assigned) — DUF2563 family protein Rv2078 lppJ (family_assigned) — hypothetical protein lppJ Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv2077A (dark) — hypothetical protein Rv2077A Rv3906c (requalified) — pullulanase Rv3906c Rv1885c (requalified) — chorismate mutase Rv1885c lpqO (family_assigned) — DUF1259 domain-containing protein lpqO lppD (requalified) — lipoprotein LppD lppD fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c TB15.3 (requalified) — universal stress protein TB15.3 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv0876c (requalified) — MFS transporter Rv0876c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.