MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2069 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
sigC (requalified) — RNA polymerase sigma factor SigC sigC Rv0093c (family_assigned) — membrane protein Rv0093c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM blaC (requalified) — beta-lactamase blaC sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c rshA (requalified) — anti-sigma factor RshA rshA rslA (requalified) — anti-sigma-L factor RslA rslA rseA (requalified) — anti-sigma E factor RseA rseA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv1907c (dark) — hypothetical protein Rv1907c Rv2468c (requalified) — hypothetical protein Rv2468c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b Rv3222c (family_assigned) — hypothetical protein Rv3222c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 pepR (family_assigned) — pitrilysin family protein pepR gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB Rv3364c (requalified) — serine protease inhibitor Rv3364c mapA (requalified) — methionine aminopeptidase mapA Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 Rv1146 (requalified) — transmembrane transport protein Rv1146 tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.