MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2059 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv2060 (family_assigned) — integral membrane protein Rv2060 rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0106 (family_assigned) — GTP-binding protein Rv0106 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 rpmG1 (requalified) — 50S ribosomal protein L33 rpmG1 rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 Rv2990c (requalified) — class I SAM-dependent methyltransferase Rv2990c Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c lppH (requalified) — lipoprotein LppH lppH sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR mntH (requalified) — divalent metal cation transporter MntH mntH zur (requalified) — zinc uptake transcriptional repressor Zur zur drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB rplI (requalified) — 50S ribosomal protein L9 rplI rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsS (requalified) — 30S ribosomal protein S19 rpsS eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 rpmI (requalified) — 50S ribosomal protein L35 rpmI rpmB1 (requalified) — 50S ribosomal protein L28 rpmB1 rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsK (requalified) — 30S ribosomal protein S11 rpsK gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv3577 (requalified) — hypothetical protein Rv3577 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT bglS (requalified) — beta-glucosidase BglS bglS arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv0923c (family_assigned) — poly-gamma-glutamate hydrolase family protein Rv0923c Rv0925c (family_assigned) — flavodoxin family protein Rv0925c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv0926c (requalified) — diacylglycerol kinase Rv0926c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.