MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2053c · 46 genes shown · anchor ppm1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fxsA (family_assigned) — FxsA family protein fxsA Rv2052c (requalified) — amidohydrolase Rv2052c ppm1 (requalified) — apolipoprotein N-acyltransferase ppm1 Rv2054 (family_assigned) — dienelactone hydrolase family protein Rv2054 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB pepD (requalified) — serine protease PepD pepD hsp (requalified) — stress-responsive chaperone Acr2 hsp lpqE (family_assigned) — hypothetical protein lpqE Rv2468c (requalified) — hypothetical protein Rv2468c htpX (requalified) — zinc metalloprotease HtpX htpX grpE (requalified) — nucleotide exchange factor GrpE grpE 35kd_ag (family_assigned) — hypothetical protein 35kd_ag trxB1 (requalified) — thioredoxin trxB1 Rv2915c (family_assigned) — amidohydrolase family protein Rv2915c Rv1382 (requalified) — transporter Rv1382 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c gca (requalified) — GDP-mannose 4%2C6-dehydratase gca aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2765 (family_assigned) — dienelactone hydrolase family protein Rv2765 gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 mprB (requalified) — two-component system sensor histidine kinase MprB mprB mpa (requalified) — proteasome ATPase mpa mprA (requalified) — two-component system response regulator MprA mprA clpB (requalified) — chaperone protein ClpB clpB clpC1 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC1 clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 nirD (family_assigned) — nitrite reductase small subunit NirD nirD htpG (requalified) — molecular chaperone HtpG htpG Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrA (requalified) — hypothetical protein qcrA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2468A (family_assigned) — hypothetical protein Rv2468A Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv1638A (family_assigned) — hypothetical protein Rv1638A Rv3837c (family_assigned) — histidine phosphatase family protein Rv3837c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.