MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2050 · 27 genes shown · anchor rpoZ · open gene page → · ← back to 1 hop

Evidence: Min score 0
rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 carD (requalified) — RNA polymerase-binding transcription factor CarD carD pafC (family_assigned) — YafY family protein pafC pafB (family_assigned) — YafY family protein pafB Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH helZ (requalified) — DEAD/DEAH box helicase helZ whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR pafA (requalified) — Pup--protein ligase pafA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.