MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2016 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2016 (dark) — hypothetical protein Rv2016 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv1765c (family_assigned) — hypothetical protein Rv1765c fic (family_assigned) — Fic/DOC family protein fic trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv0078A (family_assigned) — hypothetical protein Rv0078A Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv0229c (family_assigned) — PIN domain nuclease Rv0229c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2516c (dark) — hypothetical protein Rv2516c mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB Rv2164c (family_assigned) — hypothetical protein Rv2164c rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 Rv2979c (family_assigned) — IS607 family transposase Rv2979c Rv3642c (family_assigned) — antitoxin VbhA family protein Rv3642c Rv3640c (family_assigned) — IS256-like element IS1553 family transposase Rv3640c Rv2970A (family_assigned) — hypothetical protein Rv2970A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.