MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2009 · 46 genes shown · anchor vapC15 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB15 (requalified) — antitoxin VapB15 vapB15 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB38 (requalified) — antitoxin vapB38 relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB vapB11 (requalified) — antitoxin VapB11 vapB11 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3677c (requalified) — MBL fold metallo-hydrolase Rv3677c Rv2531c (requalified) — amino acid decarboxylase Rv2531c ilvA (requalified) — threonine ammonia-lyase ilvA fdxA (family_assigned) — ferredoxin family protein fdxA Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 relG (family_assigned) — type II toxin-antitoxin system RelE/ParE family to relG relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE relK (family_assigned) — Txe/YoeB family addiction module toxin relK mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv2864c (family_assigned) — penicillin-binding protein Rv2864c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.