MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2004c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv2005c (requalified) — universal stress protein Rv2005c Rv2003c (family_assigned) — hypothetical protein Rv2003c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv0571c (family_assigned) — phosphoribosyltransferase family protein Rv0571c nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ ctpF (requalified) — cation-transporting P-type ATPase ctpF devS (requalified) — two-component system sensor histidine kinase DevS devS Rv2630 (requalified) — archease Rv2630 Rv2624c (requalified) — universal stress protein Rv2624c Rv2629 (family_assigned) — hypothetical protein Rv2629 devR (requalified) — two-component system response regulator DevR devR Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2402 (requalified) — trehalase Rv2402 Rv0574c (family_assigned) — CapA family protein Rv0574c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk Rv2625c (family_assigned) — site-2 protease family protein Rv2625c pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB Rv2028c (requalified) — universal stress protein Rv2028c Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv3134c (requalified) — universal stress protein Rv3134c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2631 (requalified) — RNA-splicing ligase RtcB Rv2631 hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 acg (family_assigned) — FMN-binding protein Acg acg rpsC (requalified) — 30S ribosomal protein S3 rpsC rplW (requalified) — 50S ribosomal protein L23 rplW hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.