MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1976c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1976c (family_assigned) — NYN domain-containing protein Rv1976c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC cysS1 (requalified) — cysteine--tRNA ligase cysS1 rlmB (requalified) — 23S rRNA (guanosine(2251)-2'-O)-methyltransferase rlmB Rv0881 (requalified) — RNA methyltransferase Rv0881 tsnR (requalified) — RNA methyltransferase tsnR Rv0380c (requalified) — RNA methyltransferase Rv0380c Rv3577 (requalified) — hypothetical protein Rv3577 sigG (family_assigned) — sigma-70 family RNA polymerase sigma factor SigG sigG sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH whiB4 (family_assigned) — transcriptional regulator WhiB4 whiB4 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ sigE (requalified) — RNA polymerase sigma factor SigE sigE cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysE (requalified) — serine O-acetyltransferase cysE mshD (requalified) — mycothiol synthase mshD Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD serS (requalified) — serine--tRNA ligase serS carD (requalified) — RNA polymerase-binding transcription factor CarD carD rplK (requalified) — 50S ribosomal protein L11 rplK pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 rsfS (requalified) — ribosome silencing factor rsfS Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU rplT (requalified) — 50S ribosomal protein L20 rplT infC (requalified) — translation initiation factor IF-3 infC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplO (requalified) — 50S ribosomal protein L15 rplO Rv0381c (dark) — hypothetical protein Rv0381c pyrE (requalified) — orotate phosphoribosyltransferase pyrE arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 lppH (requalified) — lipoprotein LppH lppH Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1874 (family_assigned) — hypothetical protein Rv1874 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0181c (family_assigned) — pirin family protein Rv0181c Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0183 (requalified) — monoacylglycerol lipase Rv0183

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.