MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1959c · 45 genes shown · anchor parD1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv2472 (dark) — hypothetical protein Rv2472 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE3 (requalified) — antitoxin MazE3 mazE3 Rv1958c (dark) — hypothetical protein Rv1958c Rv1961 (family_assigned) — hypothetical protein Rv1961 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c parE2 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE2 hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA parD2 (requalified) — antitoxin ParD2 parD2 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 cobB (requalified) — NAD-dependent protein deacylase cobB lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv2473 (dark) — hypothetical protein Rv2473 aglA (family_assigned) — glycoside hydrolase family 13 protein aglA glbO (requalified) — group 2 truncated hemoglobin GlbO glbO Rv2469c (requalified) — HNH endonuclease Rv2469c mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c dinG (requalified) — ATP-dependent helicase DinG dinG rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2516c (dark) — hypothetical protein Rv2516c Rv2143 (family_assigned) — phosphoribosyltransferase family protein Rv2143 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB hisD (requalified) — histidinol dehydrogenase hisD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.