MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1956 · 38 genes shown · anchor secBL · open gene page → · ← back to 1 hop

Evidence: Min score 0
higA (requalified) — type II toxin-antitoxin system antitoxin HigA higA Rv1957 (requalified) — SecB-like chaperone Rv1957 higB (requalified) — type II toxin-antitoxin system toxin HigB higB PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv0836c (family_assigned) — hypothetical protein Rv0836c Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 cbs (requalified) — cystathionine beta-synthase cbs Rv1954A (dark) — Hypothetical protein Rv1954A relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2209 (requalified) — MFS transporter Rv2209 iniB (requalified) — isoniazid-induced protein IniB iniB espE (requalified) — type VII secretion system ESX-1 associated protein espE PPE6 (family_assigned) — PPE family protein PPE6 PPE6 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.